Updated Upstream (Bukkit/CraftBukkit/Spigot)

Upstream has released updates that appears to apply and compile correctly.
This update has not been tested by PaperMC and as with ANY update, please do your own testing

Developers!: You will need to clean up your work/Minecraft/1.13.2 folder
for this

Also, restore a patch that was dropped in the last upstream

Bukkit Changes:
279eeab3 Fix command description not being set
96e2bb18 Remove debug print from SyntheticEventTest

CraftBukkit Changes:
d3ed1516 Fix dangerously threaded beacons
217a293d Don't relocate joptsimple to allow --help to work.
1be05a21 Prepare for imminent Java 12 release
a49270b2 Mappings Update
5259d80c SPIGOT-4669: Fix PlayerTeleportEvent coordinates for relative teleports

Spigot Changes:
e6eb36f2 Rebuild patches

Spigot-Server-Patches/Configurable-packet-in-spam-threshold.patch

@@ -5,7 +5,7 @@ Subject: [PATCH] Configurable packet in spam threshold
 
 
 diff --git a/src/main/java/com/destroystokyo/paper/PaperConfig.java b/src/main/java/com/destroystokyo/paper/PaperConfig.java
-index 2ae623e7d..f5bd2245a 100644
+index 894501c61..dfb931298 100644
 --- a/src/main/java/com/destroystokyo/paper/PaperConfig.java
 +++ b/src/main/java/com/destroystokyo/paper/PaperConfig.java
 @@ -0,0 +0,0 @@ public class PaperConfig {
@@ -23,7 +23,7 @@ index 2ae623e7d..f5bd2245a 100644
 +    }
  }
 diff --git a/src/main/java/net/minecraft/server/PlayerConnection.java b/src/main/java/net/minecraft/server/PlayerConnection.java
-index 5715d7ba8..c31f84a84 100644
+index 041e4608e..f5624f3d6 100644
 --- a/src/main/java/net/minecraft/server/PlayerConnection.java
 +++ b/src/main/java/net/minecraft/server/PlayerConnection.java
 @@ -0,0 +0,0 @@ public class PlayerConnection implements PacketListenerPlayIn, ITickable {